Almalinux package update failure

[tom9909]

Hi everyone,

Has anyone else been having issues with their update upcp scripts on Almalinux?

Any advise on best practices when it comes to these? I can skip-broken as suggested but not sure if I'd be missing critical package updates.

[2023-05-24 21:15:34 +1000] Processing: Running update-packages
[2023-05-24 21:15:34 +1000] - Processing command `/usr/local/cpanel/scripts/update-packages`
[2023-05-24 21:15:35 +1000] [/usr/local/cpanel/scripts/update-packages] checkyum version 22.3 (excludes: bind-chroot)
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] Last metadata expiration check: 3:54:17 ago on Wed May 24 17:21:20 2023.
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] Error:
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] Problem 1: package shim-x64-15.6-1.el8.alma.1.x86_64 requires almalinux(kernel-sig-key) >= 202303, but none of the providers can be installed
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - cannot install the best update candidate for package shim-x64-15.6-1.el8.alma.x86_64
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package kernel-core-4.18.0-477.10.1.el8_8.x86_64 is filtered out by exclude filtering
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] Problem 2: package grub2-efi-x64-1:2.02-148.el8.alma.x86_64 requires /boot/efi/EFI/almalinux/shimx64.efi, but none of the providers can be installed
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-efi-x64-1:2.02-148.el8.alma.x86_64 conflicts with shim-x64 <= 15.6-1.el8.alma provided by shim-x64-15.6-1.el8.alma.x86_64
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package shim-x64-15.6-1.el8.alma.1.x86_64 requires almalinux(kernel-sig-key) >= 202303, but none of the providers can be installed
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - cannot install the best update candidate for package grub2-efi-x64-1:2.02-142.el8_7.3.alma.x86_64
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package kernel-core-4.18.0-477.10.1.el8_8.x86_64 is filtered out by exclude filtering
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] Problem 3: package shim-x64-15.6-1.el8.alma.x86_64 requires /boot/efi/EFI/almalinux/grubx64.efi, but none of the providers can be installed
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-efi-x64-1:2.02-148.el8.alma.x86_64 conflicts with shim-x64 <= 15.6-1.el8.alma provided by shim-x64-15.6-1.el8.alma.x86_64
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-efi-x64-1:2.02-142.el8_7.3.alma.x86_64 requires grub2-common = 1:2.02-142.el8_7.3.alma, but none of the providers can be installed
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - problem with installed package shim-x64-15.6-1.el8.alma.x86_64
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - cannot install both grub2-common-1:2.02-148.el8.alma.noarch and grub2-common-1:2.02-142.el8_7.3.alma.noarch
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package shim-x64-15.6-1.el8.alma.1.x86_64 requires almalinux(kernel-sig-key) >= 202303, but none of the providers can be installed
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - cannot install the best update candidate for package grub2-common-1:2.02-142.el8_7.3.alma.noarch
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package kernel-core-4.18.0-477.10.1.el8_8.x86_64 is filtered out by exclude filtering
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] Problem 4: package grub2-efi-x64-1:2.02-148.el8.alma.x86_64 requires /boot/efi/EFI/almalinux/shimx64.efi, but none of the providers can be installed
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-efi-x64-1:2.02-148.el8.alma.x86_64 conflicts with shim-x64 <= 15.6-1.el8.alma provided by shim-x64-15.6-1.el8.alma.x86_64
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - problem with installed package grub2-efi-x64-1:2.02-142.el8_7.3.alma.x86_64
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-efi-x64-1:2.02-142.el8_7.3.alma.x86_64 requires grub2-tools = 1:2.02-142.el8_7.3.alma, but none of the providers can be installed
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-tools-efi-1:2.02-148.el8.alma.x86_64 obsoletes grub2-tools < 1:2.02-148.el8.alma provided by grub2-tools-1:2.02-142.el8_7.3.alma.x86_64
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package shim-x64-15.6-1.el8.alma.1.x86_64 requires almalinux(kernel-sig-key) >= 202303, but none of the providers can be installed
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - cannot install the best update candidate for package grub2-tools-efi-1:2.02-142.el8_7.3.alma.x86_64
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package kernel-core-4.18.0-477.10.1.el8_8.x86_64 is filtered out by exclude filtering
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] (try to add '--allowerasing' to command line to replace conflicting packages or '--skip-broken' to skip uninstallable packages or '--nobest' to use not only best candidate packages)
[2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] (XID zjt4fn) “/usr/bin/yum” reported error code “1” when it ended:
[2023-05-24 21:15:38 +1000] E [/usr/local/cpanel/scripts/update-packages] The “/usr/local/cpanel/scripts/update-packages” command (process 3082839) reported error number 1 when it ended.

 

[cPRex]

Hey there! This is an issue with the OS packages themselves, and not related to a cPanel update. I did check a default cPanel system and confirmed that "shim" is not a package that is included or necessary for cPanel, so if you're not using that you may want to just try removing that specific package and then updating Yum again with the following commands:

yum clean all
yum makecache
yum update

Can you try that and see if that gets things working better for you?

 

[bloatedstoat]

Hey tom9909,

Did you resolve this mate? We're having similar issues with a newly provisioned server that has just had accounts migrated to it. I opened a forum thread myself on it.

The “/usr/local/cpanel/scripts/update-packages” command reported error number 1 when it ended

Hello. Our shiny new server is not happy. /usr/local/cpanel/scripts/update-packages died during the update process of upcp with a whole slew of errors. The output is herewith: /usr/local/cpanel/scripts/update-packages checkyum version 22.3 (excludes: bind-chroot) This system is receiving...

forums.cpanel.net

I notice there is no resolution to your post so curious to know if you managed to fix it?

Thank you.

 

[tom9909]

Hey tom9909,

Did you resolve this mate? We're having similar issues with a newly provisioned server that has just had accounts migrated to it. I opened a forum thread myself on it.

The “/usr/local/cpanel/scripts/update-packages” command reported error number 1 when it ended

Hello. Our shiny new server is not happy. /usr/local/cpanel/scripts/update-packages died during the update process of upcp with a whole slew of errors. The output is herewith: /usr/local/cpanel/scripts/update-packages checkyum version 22.3 (excludes: bind-chroot) This system is receiving...

forums.cpanel.net

I notice there is no resolution to your post so curious to know if you managed to fix it?

Thank you.

Sorry, just got back from the weekend.

I've posted the question over at the AlmaLinux board and am awaiting a response. Update Package Script Errors

Ours is a cPanel DNS only server, so no plugins or anything out of the defaults. Ill try the YUM clean suggestions from @cPRex now and see what happens overnight

 

[bloatedstoat]

Thank you. Looking forward to getting to the bottom of this one.

From scouring the internet it appears to be a repository issue, although this is conjecture at this stage.

I've also opened a ticket with our server provider who installed the OS and have yet to hear back from them, as soon as that happens I'll update this thread.

None of the commands cpRex provided worked for me.

 

[tom9909]

Thank you. Looking forward to getting to the bottom of this one.

From scouring the internet it appears to be a repository issue, although this is conjecture at this stage.

I've also opened a ticket with our server provider who installed the OS and have yet to hear back from them, as soon as that happens I'll update this thread.

None of the commands cpRex provided worked for me.

I'm in agreeance that its a repository issue, although would have thought there would have been more people noting an issue on their forums and reddit - but there's nothing....

 

[bloatedstoat]

I've just added to your AlmaLinux thread in the hope it'll bump. There are mentions of this issue out there on the internet with random solutions I am not game to try on a production server.

 

[dpearson]

This is likely not a repository issue at all.

The key is this
- [2023-05-24 21:15:38 +1000] [/usr/local/cpanel/scripts/update-packages] - package kernel-core-4.18.0-477.10.1.el8_8.x86_64 is filtered out by exclude filtering

If the kernel update has been excluded, then grub2 and shim should fail as they all rely on one another.

Remove the kernel from the excluded updates (why it's excluded in the first place who knows) and I bet it works.

 

[bloatedstoat]

Hello again,

I've opened a support ticket #95068187

Tom do you have your UPCP log for the day before the issues started in your case?

Worth pointing out here that I am running a CloudLinux 8 conversion from AlmaLinux 8 and not pure AlmaLinux 8.

 

[tom9909]

Hello again,

I've opened a support ticket #95068187

Tom do you have your UPCP log for the day before the issues started in your case?

Worth pointing out here that I am running a CloudLinux 8 conversion from AlmaLinux 8 and not pure AlmaLinux 8.

Hi, this is the update log prior to the issue occurring.

----------------------------------------------------------------------------------------------------
=> Log opened from cPanel Update (upcp) - Slave (2863020) at Thu May 18 21:15:01 2023
[2023-05-18 21:15:01 +1000] Detected cron=1 (cron mode set from command line)
[2023-05-18 21:15:01 +1000] 1% complete
[2023-05-18 21:15:01 +1000] Running Standardized hooks
[2023-05-18 21:15:01 +1000] 2% complete
[2023-05-18 21:15:01 +1000] mtime on upcp is 1669125472 (Wed Nov 23 00:57:52 2022)
----------------------------------------------------------------------------------------------------
=> Log opened from /usr/local/cpanel/scripts/updatenow (2863022) at Thu May 18 21:15:02 2023
[2023-05-18 21:15:02 +1000] Running version '11.110.0.5' of updatenow.
[2023-05-18 21:15:02 +1000] Retrieved public key from vendor: cpanel, category: development, url: https://securedownloads.cpanel.net/cPanelDevelopmentKey.asc
[2023-05-18 21:15:02 +1000] Detected version '11.110.0.5' from version file.
[2023-05-18 21:15:21 +1000] Successfully verified signature for cpanel (key types: release).
[2023-05-18 21:15:21 +1000] Target version set to '11.110.0.5'
[2023-05-18 21:15:21 +1000] Up to date (11.110.0.5)
=> Log closed Thu May 18 21:15:21 2023
[2023-05-18 21:15:21 +1000] 17% complete
=> Log closed Thu May 18 21:15:21 2023
----------------------------------------------------------------------------------------------------
=> Log opened from /usr/local/cpanel/scripts/maintenance (2863070) at Thu May 18 21:15:22 2023
[2023-05-18 21:15:22 +1000] Processing: Assuring needed symlinks in 3rdparty/bin are in place.
[2023-05-18 21:15:22 +1000] 21% complete
[2023-05-18 21:15:22 +1000] - Processing command `/usr/local/cpanel/scripts/link_3rdparty_binaries`
[2023-05-18 21:15:22 +1000] - Finished command `/usr/local/cpanel/scripts/link_3rdparty_binaries` in 0.012 seconds
[2023-05-18 21:15:22 +1000] 23% complete
[2023-05-18 21:15:22 +1000] Processing: Setting clock
[2023-05-18 21:15:22 +1000] 24% complete
[2023-05-18 21:15:22 +1000] - Processing command `/usr/local/cpanel/scripts/rdate`
[2023-05-18 21:15:24 +1000] - Finished command `/usr/local/cpanel/scripts/rdate` in 1.869 seconds
[2023-05-18 21:15:24 +1000] 26% complete
[2023-05-18 21:15:24 +1000] 28% complete
[2023-05-18 21:15:24 +1000] - Finished in 0.001 seconds
[2023-05-18 21:15:24 +1000] Processing: Setting up resolver workarounds
[2023-05-18 21:15:24 +1000] - Finished in 0.016 seconds
[2023-05-18 21:15:24 +1000] 29% complete
[2023-05-18 21:15:24 +1000] - Finished in 0.016 seconds
[2023-05-18 21:15:24 +1000] 31% complete
[2023-05-18 21:15:24 +1000] - Finished in 0.003 seconds
[2023-05-18 21:15:24 +1000] Processing: Checking RPM DB for corruption
[2023-05-18 21:15:24 +1000] - Processing command `/usr/local/cpanel/scripts/find_and_fix_rpm_issues`
[2023-05-18 21:15:24 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] glibc-2.28-211.el8.x86_64
[2023-05-18 21:15:24 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] Testing if rpm_is_working RPM is installed
[2023-05-18 21:15:24 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] Testing if it's possible to install a simple RPM
[2023-05-18 21:15:24 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] Verifying... ########################################
[2023-05-18 21:15:24 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] Preparing... ########################################
[2023-05-18 21:15:24 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] Updating / installing...
[2023-05-18 21:15:24 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] rpm_is_working-1.0-0 ########################################
[2023-05-18 21:15:27 +1000] 32% complete
[2023-05-18 21:15:27 +1000] - Finished in 3.517 seconds
[2023-05-18 21:15:27 +1000] Processing: Running update-packages
[2023-05-18 21:15:27 +1000] - Processing command `/usr/local/cpanel/scripts/update-packages`
[2023-05-18 21:15:27 +1000] [/usr/local/cpanel/scripts/update-packages] checkyum version 22.3 (excludes: bind-chroot)
[2023-05-18 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] Last metadata expiration check: 1:30:06 ago on Thu May 18 19:45:22 2023.
[2023-05-18 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] Dependencies resolved.
[2023-05-18 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] Nothing to do.
[2023-05-18 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] Complete!
[2023-05-18 21:15:29 +1000] - Finished command `/usr/local/cpanel/scripts/update-packages` in 2.276 seconds
[2023-05-18 21:15:29 +1000] 34% complete
[2023-05-18 21:15:29 +1000] - Finished in 2.277 seconds
[2023-05-18 21:15:29 +1000] 36% complete
[2023-05-18 21:15:29 +1000] - Finished in 0.132 seconds
[2023-05-18 21:15:29 +1000] Processing: Purging cpupdate.conf of invalid entries
[2023-05-18 21:15:29 +1000] 37% complete
[2023-05-18 21:15:29 +1000] 39% complete
[2023-05-18 21:15:29 +1000] - Finished in 0.002 seconds
[2023-05-18 21:15:29 +1000] Purging upcp logs older than 45 days.
[2023-05-18 21:15:29 +1000] 40% complete
[2023-05-18 21:15:29 +1000] - Finished in 0.000 seconds
[2023-05-18 21:15:29 +1000] Processing: Updating cPanel signing keys.
[2023-05-18 21:15:29 +1000] 42% complete
[2023-05-18 21:15:29 +1000] - Processing command `/usr/local/cpanel/scripts/updatesigningkey`
[2023-05-18 21:15:30 +1000] - Finished command `/usr/local/cpanel/scripts/updatesigningkey` in 0.433 seconds
[2023-05-18 21:15:30 +1000] 44% complete
[2023-05-18 21:15:30 +1000] Processing: Updating system packages: sysup
[2023-05-18 21:15:30 +1000] - Processing command `/usr/local/cpanel/scripts/sysup`
[2023-05-18 21:15:30 +1000] [/usr/local/cpanel/scripts/sysup] checkyum version 22.3 (excludes: bind-chroot)
[2023-05-18 21:15:31 +1000] [/usr/local/cpanel/scripts/sysup] All Needed Packages are already installed.
[2023-05-18 21:15:31 +1000] - Finished command `/usr/local/cpanel/scripts/sysup` in 0.917 seconds
[2023-05-18 21:15:31 +1000] 45% complete
[2023-05-18 21:15:31 +1000] - Finished in 0.918 seconds
[2023-05-18 21:15:31 +1000] Processing: Restarting any outdated services
[2023-05-18 21:15:31 +1000] 47% complete
[2023-05-18 21:15:31 +1000] - Processing command `/usr/local/cpanel/scripts/find_outdated_services --auto`
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/scripts/find_outdated_services] Looking for outdated services …
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/scripts/find_outdated_services] 82 files removed
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/scripts/find_outdated_services]
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/scripts/find_outdated_services] The system found 1 outdated service:
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/scripts/find_outdated_services] queueprocd
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/scripts/find_outdated_services]
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/scripts/find_outdated_services] Restarting “queueprocd” …
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/scripts/find_outdated_services] [1mThe system has restarted “queueprocd”.[0m
[2023-05-18 21:15:33 +1000] - Finished command `/usr/local/cpanel/scripts/find_outdated_services --auto` in 2.226 seconds
[2023-05-18 21:15:33 +1000] 48% complete
[2023-05-18 21:15:33 +1000] Processing: Checking for a valid C Compiler.
[2023-05-18 21:15:33 +1000] 50% complete
[2023-05-18 21:15:33 +1000] - Processing command `/usr/local/cpanel/scripts/checkccompiler`
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/scripts/checkccompiler] C compiler (/usr/bin/gcc) OK
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/scripts/checkccompiler] Tuned C compiler not available because it is not enabled
[2023-05-18 21:15:33 +1000] - Finished command `/usr/local/cpanel/scripts/checkccompiler` in 0.283 seconds
[2023-05-18 21:15:33 +1000] 52% complete
[2023-05-18 21:15:33 +1000] Processing: Ensuring locale databases are up to date
[2023-05-18 21:15:33 +1000] 53% complete
[2023-05-18 21:15:33 +1000] 55% complete
[2023-05-18 21:15:33 +1000] - Finished in 0.002 seconds
[2023-05-18 21:15:33 +1000] Processing: Migrating feature lists to current version (if needed)
[2023-05-18 21:15:33 +1000] 57% complete
[2023-05-18 21:15:33 +1000] - Processing command `/usr/local/cpanel/bin/migrate_all_feature_lists_to_current`
[2023-05-18 21:15:33 +1000] [/usr/local/cpanel/bin/migrate_all_feature_lists_to_current] Migrated 0 feature list(s)
[2023-05-18 21:15:33 +1000] - Finished command `/usr/local/cpanel/bin/migrate_all_feature_lists_to_current` in 0.026 seconds
[2023-05-18 21:15:33 +1000] 58% complete
[2023-05-18 21:15:33 +1000] Processing: Checking for main IP changes
[2023-05-18 21:15:33 +1000] 60% complete
[2023-05-18 21:15:33 +1000] - Processing command `/usr/local/cpanel/scripts/mainipcheck`
[2023-05-18 21:15:34 +1000] - Finished command `/usr/local/cpanel/scripts/mainipcheck` in 1.099 seconds
[2023-05-18 21:15:34 +1000] 61% complete
[2023-05-18 21:15:34 +1000] Processing: Updating neighbor netblocks
[2023-05-18 21:15:34 +1000] 63% complete
[2023-05-18 21:15:34 +1000] - Processing command `/usr/local/cpanel/scripts/update_neighbor_netblocks`
[2023-05-18 21:15:34 +1000] - Finished command `/usr/local/cpanel/scripts/update_neighbor_netblocks` in 0.044 seconds
[2023-05-18 21:15:34 +1000] 65% complete
[2023-05-18 21:15:34 +1000] Processing: Updating known proxy ips
[2023-05-18 21:15:34 +1000] 66% complete
[2023-05-18 21:15:34 +1000] - Processing command `/usr/local/cpanel/scripts/update_known_proxy_ips`
[2023-05-18 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/update_known_proxy_ips` in 0.053 seconds
[2023-05-18 21:15:35 +1000] 68% complete
[2023-05-18 21:15:35 +1000] Processing: Validating server hostname
[2023-05-18 21:15:35 +1000] 69% complete
[2023-05-18 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/check_valid_server_hostname --notify`
[2023-05-18 21:15:35 +1000] [/usr/local/cpanel/scripts/check_valid_server_hostname] OK
[2023-05-18 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/check_valid_server_hostname --notify` in 0.056 seconds
[2023-05-18 21:15:35 +1000] 71% complete
[2023-05-18 21:15:35 +1000] Processing: Validating cPanel system users
[2023-05-18 21:15:35 +1000] 73% complete
[2023-05-18 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/checkusers`
[2023-05-18 21:15:35 +1000] [/usr/local/cpanel/scripts/checkusers] Homedir: /var/cpanel/userhomes/cpanel
[2023-05-18 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/checkusers` in 0.006 seconds
[2023-05-18 21:15:35 +1000] 74% complete
[2023-05-18 21:15:35 +1000] Processing: Checking and repairing nameserver config
[2023-05-18 21:15:35 +1000] 76% complete
[2023-05-18 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/fixrndc`
[2023-05-18 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/fixrndc` in 0.045 seconds
[2023-05-18 21:15:35 +1000] 77% complete
[2023-05-18 21:15:35 +1000] Processing: Setting up IP aliases startup
[2023-05-18 21:15:35 +1000] 79% complete
[2023-05-18 21:15:35 +1000] - Processing command `/usr/local/cpanel/whostmgr/bin/setupipaliases`
[2023-05-18 21:15:35 +1000] - Finished command `/usr/local/cpanel/whostmgr/bin/setupipaliases` in 0.113 seconds
[2023-05-18 21:15:35 +1000] 81% complete
[2023-05-18 21:15:35 +1000] Processing: Checking cPanel packages (with no digest check or broken check)
[2023-05-18 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/check_cpanel_pkgs --list-only --long-list --notify --no-digest --no-broken`
[2023-05-18 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/check_cpanel_pkgs --list-only --long-list --notify --no-digest --no-broken` in 0.471 seconds
[2023-05-18 21:15:35 +1000] 82% complete
[2023-05-18 21:15:35 +1000] - Finished in 0.471 seconds
[2023-05-18 21:15:35 +1000] Processing: Running env auto repair
[2023-05-18 21:15:35 +1000] 84% complete
[2023-05-18 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/vzzo-fixer`
[2023-05-18 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/vzzo-fixer` in 0.004 seconds
[2023-05-18 21:15:35 +1000] 85% complete
[2023-05-18 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/quota_auto_fix`
[2023-05-18 21:15:35 +1000] [/usr/local/cpanel/scripts/quota_auto_fix] quota test: check passed
[2023-05-18 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/quota_auto_fix` in 0.011 seconds
[2023-05-18 21:15:35 +1000] 87% complete
[2023-05-18 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/clear_orphaned_virtfs_mounts --inactiveonly`
[2023-05-18 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/clear_orphaned_virtfs_mounts --inactiveonly` in 0.063 seconds
[2023-05-18 21:15:35 +1000] 89% complete
[2023-05-18 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/disable_prelink`
[2023-05-18 21:15:36 +1000] - Finished command `/usr/local/cpanel/scripts/disable_prelink` in 0.214 seconds
[2023-05-18 21:15:36 +1000] 90% complete
[2023-05-18 21:15:36 +1000] Processing: Cleaning up orphaned filesystem quotas
[2023-05-18 21:15:36 +1000] 92% complete
[2023-05-18 21:15:36 +1000] - Processing command `/usr/local/cpanel/scripts/cleanquotas`
[2023-05-18 21:15:36 +1000] - Finished command `/usr/local/cpanel/scripts/cleanquotas` in 0.056 seconds
[2023-05-18 21:15:36 +1000] 93% complete
[2023-05-18 21:15:36 +1000] - Processing command `/usr/local/cpanel/scripts/autorepair autorepair`
[2023-05-18 21:15:36 +1000] [/usr/local/cpanel/scripts/autorepair] Requesting script ... Done
[2023-05-18 21:15:36 +1000] [/usr/local/cpanel/scripts/autorepair] Auto Repair is running...Running Auto Repair routines
[2023-05-18 21:15:36 +1000] [/usr/local/cpanel/scripts/autorepair] Finished running Auto Repair routines
[2023-05-18 21:15:36 +1000] [/usr/local/cpanel/scripts/autorepair] ...Auto Repair is done.
[2023-05-18 21:15:36 +1000] - Finished command `/usr/local/cpanel/scripts/autorepair autorepair` in 0.154 seconds
[2023-05-18 21:15:36 +1000] 95% complete
[2023-05-18 21:15:36 +1000] - Processing command `/usr/local/cpanel/scripts/purge_old_config_caches`
[2023-05-18 21:15:36 +1000] - Finished command `/usr/local/cpanel/scripts/purge_old_config_caches` in 0.016 seconds
[2023-05-18 21:15:36 +1000] - Processing command `/usr/local/cpanel/scripts/cleansessions`
[2023-05-18 21:15:36 +1000] - Finished command `/usr/local/cpanel/scripts/cleansessions` in 0.032 seconds
[2023-05-18 21:15:36 +1000] - Processing command `/usr/local/cpanel/scripts/checkbashshell`
[2023-05-18 21:15:36 +1000] - Finished command `/usr/local/cpanel/scripts/checkbashshell` in 0.005 seconds
[2023-05-18 21:15:36 +1000] - Finished in 0.000 seconds
[2023-05-18 21:15:36 +1000] Setting up cronjobs
[2023-05-18 21:15:36 +1000] Setting Up update_db_cache Crontab
[2023-05-18 21:15:36 +1000] Setting Up update_maiman_cache Crontab
[2023-05-18 21:15:36 +1000] Setting Up dcpumon Crontab
[2023-05-18 21:15:36 +1000] - Finished in 0.013 seconds
[2023-05-18 21:15:36 +1000] - Processing command `/usr/local/cpanel/scripts/dnsqueuecron`
[2023-05-18 21:15:36 +1000] - Finished command `/usr/local/cpanel/scripts/dnsqueuecron` in 0.006 seconds
[2023-05-18 21:15:36 +1000] Processing: Rebuild WHM chrome cache
[2023-05-18 21:15:36 +1000] - Processing command `/usr/local/cpanel/scripts/rebuild_whm_chrome`
[2023-05-18 21:15:37 +1000] - Finished command `/usr/local/cpanel/scripts/rebuild_whm_chrome` in 1.392 seconds
[2023-05-18 21:15:37 +1000] Processing: Scheduling task to check service default SSL/TLS certificates
[2023-05-18 21:15:37 +1000] - Finished in 0.002 seconds
[2023-05-18 21:15:37 +1000] Processing: Purging invalid or soon-to-expire Domain TLS entries for service domains
[2023-05-18 21:15:37 +1000] - Processing command `/usr/local/cpanel/scripts/check_domain_tls_service_domains.pl --prune`
[2023-05-18 21:15:37 +1000] - Finished command `/usr/local/cpanel/scripts/check_domain_tls_service_domains.pl --prune` in 0.151 seconds
[2023-05-18 21:15:37 +1000] Processing: Cleaning up temporary wheel/sudo users
[2023-05-18 21:15:37 +1000] - Processing command `/usr/local/cpanel/scripts/clean_up_temp_wheel_users`
[2023-05-18 21:15:37 +1000] - Finished command `/usr/local/cpanel/scripts/clean_up_temp_wheel_users` in 0.077 seconds
[2023-05-18 21:15:37 +1000] - Finished in 0.000 seconds
[2023-05-18 21:15:37 +1000] - Finished in 0.000 seconds
[2023-05-18 21:15:37 +1000] - Finished in 0.000 seconds
[2023-05-18 21:15:38 +1000] - Finished in 0.244 seconds
[2023-05-18 21:15:38 +1000] Processing: Cleaning Signature Timestamp Cache
[2023-05-18 21:15:38 +1000] - Finished in 0.001 seconds
[2023-05-18 21:15:38 +1000] - Finished in 0.002 seconds
[2023-05-18 21:15:38 +1000] Processing: Checking End Of Life for current version.
[2023-05-18 21:15:38 +1000] - Finished in 0.060 seconds
[2023-05-18 21:15:38 +1000] Processing:
[2023-05-18 21:15:38 +1000] DNSONLY maintenance complete.
=> Log closed Thu May 18 21:15:38 2023
----------------------------------------------------------------------------------------------------
=> Log opened from cPanel Update (upcp) - Slave (2863020) at Thu May 18 21:15:38 2023
[2023-05-18 21:15:38 +1000] Pre Maintenance completed successfully
[2023-05-18 21:15:38 +1000] 95% complete
[2023-05-18 21:15:38 +1000] Running Standardized hooks
[2023-05-18 21:15:38 +1000] 100% complete
[2023-05-18 21:15:38 +1000]
[2023-05-18 21:15:38 +1000] cPanel update completed
[2023-05-18 21:15:38 +1000] A log of this update is available at /var/cpanel/updatelogs/update.2863020.1334414535.1671064356.log
[2023-05-18 21:15:38 +1000] Removing upcp pidfile
[2023-05-18 21:15:38 +1000]
[2023-05-18 21:15:38 +1000] Completed all updates
=> Log closed Thu May 18 21:15:38 2023

 

[tom9909]

and this is the log following:

----------------------------------------------------------------------------------------------------
=> Log opened from cPanel Update (upcp) - Slave (2899489) at Fri May 19 21:15:02 2023
[2023-05-19 21:15:02 +1000] Detected cron=1 (cron mode set from command line)
[2023-05-19 21:15:02 +1000] 1% complete
[2023-05-19 21:15:02 +1000] Running Standardized hooks
[2023-05-19 21:15:02 +1000] 2% complete
[2023-05-19 21:15:02 +1000] mtime on upcp is 1669125472 (Wed Nov 23 00:57:52 2022)
----------------------------------------------------------------------------------------------------
=> Log opened from /usr/local/cpanel/scripts/updatenow (2899491) at Fri May 19 21:15:03 2023
[2023-05-19 21:15:03 +1000] Running version '11.110.0.5' of updatenow.
[2023-05-19 21:15:03 +1000] Retrieved public key from vendor: cpanel, category: development, url: https://securedownloads.cpanel.net/cPanelDevelopmentKey.asc
[2023-05-19 21:15:03 +1000] Detected version '11.110.0.5' from version file.
[2023-05-19 21:15:19 +1000] Successfully verified signature for cpanel (key types: release).
[2023-05-19 21:15:19 +1000] Target version set to '11.110.0.5'
[2023-05-19 21:15:19 +1000] Up to date (11.110.0.5)
=> Log closed Fri May 19 21:15:19 2023
[2023-05-19 21:15:19 +1000] 17% complete
=> Log closed Fri May 19 21:15:19 2023
----------------------------------------------------------------------------------------------------
=> Log opened from /usr/local/cpanel/scripts/maintenance (2899541) at Fri May 19 21:15:19 2023
[2023-05-19 21:15:19 +1000] Processing: Assuring needed symlinks in 3rdparty/bin are in place.
[2023-05-19 21:15:19 +1000] 21% complete
[2023-05-19 21:15:19 +1000] - Processing command `/usr/local/cpanel/scripts/link_3rdparty_binaries`
[2023-05-19 21:15:19 +1000] - Finished command `/usr/local/cpanel/scripts/link_3rdparty_binaries` in 0.013 seconds
[2023-05-19 21:15:19 +1000] 23% complete
[2023-05-19 21:15:19 +1000] Processing: Setting clock
[2023-05-19 21:15:19 +1000] 24% complete
[2023-05-19 21:15:19 +1000] - Processing command `/usr/local/cpanel/scripts/rdate`
[2023-05-19 21:15:22 +1000] - Finished command `/usr/local/cpanel/scripts/rdate` in 2.177 seconds
[2023-05-19 21:15:22 +1000] 26% complete
[2023-05-19 21:15:22 +1000] 28% complete
[2023-05-19 21:15:22 +1000] - Finished in 0.001 seconds
[2023-05-19 21:15:22 +1000] Processing: Setting up resolver workarounds
[2023-05-19 21:15:22 +1000] - Finished in 0.018 seconds
[2023-05-19 21:15:22 +1000] 29% complete
[2023-05-19 21:15:22 +1000] - Finished in 0.018 seconds
[2023-05-19 21:15:22 +1000] 31% complete
[2023-05-19 21:15:22 +1000] - Finished in 0.003 seconds
[2023-05-19 21:15:22 +1000] Processing: Checking RPM DB for corruption
[2023-05-19 21:15:22 +1000] - Processing command `/usr/local/cpanel/scripts/find_and_fix_rpm_issues`
[2023-05-19 21:15:22 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] glibc-2.28-211.el8.x86_64
[2023-05-19 21:15:22 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] Testing if rpm_is_working RPM is installed
[2023-05-19 21:15:22 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] Testing if it's possible to install a simple RPM
[2023-05-19 21:15:22 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] Verifying... ########################################
[2023-05-19 21:15:22 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] Preparing... ########################################
[2023-05-19 21:15:22 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] Updating / installing...
[2023-05-19 21:15:22 +1000] [/usr/local/cpanel/scripts/find_and_fix_rpm_issues] rpm_is_working-1.0-0 ########################################
[2023-05-19 21:15:26 +1000] 32% complete
[2023-05-19 21:15:26 +1000] - Finished in 4.467 seconds
[2023-05-19 21:15:26 +1000] Processing: Running update-packages
[2023-05-19 21:15:26 +1000] - Processing command `/usr/local/cpanel/scripts/update-packages`
[2023-05-19 21:15:26 +1000] [/usr/local/cpanel/scripts/update-packages] checkyum version 22.3 (excludes: bind-chroot)
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] Last metadata expiration check: 1:40:20 ago on Fri May 19 19:35:08 2023.
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] Error:
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] Problem 1: package shim-x64-15.6-1.el8.alma.1.x86_64 requires almalinux(kernel-sig-key) >= 202303, but none of the providers can be installed
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - cannot install the best update candidate for package shim-x64-15.6-1.el8.alma.x86_64
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package kernel-core-4.18.0-477.10.1.el8_8.x86_64 is filtered out by exclude filtering
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] Problem 2: package grub2-efi-x64-1:2.02-148.el8.alma.x86_64 requires /boot/efi/EFI/almalinux/shimx64.efi, but none of the providers can be installed
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-efi-x64-1:2.02-148.el8.alma.x86_64 conflicts with shim-x64 <= 15.6-1.el8.alma provided by shim-x64-15.6-1.el8.alma.x86_64
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package shim-x64-15.6-1.el8.alma.1.x86_64 requires almalinux(kernel-sig-key) >= 202303, but none of the providers can be installed
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - cannot install the best update candidate for package grub2-efi-x64-1:2.02-142.el8_7.3.alma.x86_64
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package kernel-core-4.18.0-477.10.1.el8_8.x86_64 is filtered out by exclude filtering
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] Problem 3: package shim-x64-15.6-1.el8.alma.x86_64 requires /boot/efi/EFI/almalinux/grubx64.efi, but none of the providers can be installed
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-efi-x64-1:2.02-148.el8.alma.x86_64 conflicts with shim-x64 <= 15.6-1.el8.alma provided by shim-x64-15.6-1.el8.alma.x86_64
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-efi-x64-1:2.02-142.el8_7.3.alma.x86_64 requires grub2-common = 1:2.02-142.el8_7.3.alma, but none of the providers can be installed
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - problem with installed package shim-x64-15.6-1.el8.alma.x86_64
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - cannot install both grub2-common-1:2.02-148.el8.alma.noarch and grub2-common-1:2.02-142.el8_7.3.alma.noarch
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package shim-x64-15.6-1.el8.alma.1.x86_64 requires almalinux(kernel-sig-key) >= 202303, but none of the providers can be installed
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - cannot install the best update candidate for package grub2-common-1:2.02-142.el8_7.3.alma.noarch
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package kernel-core-4.18.0-477.10.1.el8_8.x86_64 is filtered out by exclude filtering
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] Problem 4: package grub2-efi-x64-1:2.02-148.el8.alma.x86_64 requires /boot/efi/EFI/almalinux/shimx64.efi, but none of the providers can be installed
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-efi-x64-1:2.02-148.el8.alma.x86_64 conflicts with shim-x64 <= 15.6-1.el8.alma provided by shim-x64-15.6-1.el8.alma.x86_64
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - problem with installed package grub2-efi-x64-1:2.02-142.el8_7.3.alma.x86_64
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-efi-x64-1:2.02-142.el8_7.3.alma.x86_64 requires grub2-tools = 1:2.02-142.el8_7.3.alma, but none of the providers can be installed
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package grub2-tools-efi-1:2.02-148.el8.alma.x86_64 obsoletes grub2-tools < 1:2.02-148.el8.alma provided by grub2-tools-1:2.02-142.el8_7.3.alma.x86_64
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package shim-x64-15.6-1.el8.alma.1.x86_64 requires almalinux(kernel-sig-key) >= 202303, but none of the providers can be installed
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - cannot install the best update candidate for package grub2-tools-efi-1:2.02-142.el8_7.3.alma.x86_64
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] - package kernel-core-4.18.0-477.10.1.el8_8.x86_64 is filtered out by exclude filtering
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] (try to add '--allowerasing' to command line to replace conflicting packages or '--skip-broken' to skip uninstallable packages or '--nobest' to use not only best candidate packages)
[2023-05-19 21:15:29 +1000] [/usr/local/cpanel/scripts/update-packages] (XID ugzqxh) “/usr/bin/yum” reported error code “1” when it ended:
[2023-05-19 21:15:29 +1000] E [/usr/local/cpanel/scripts/update-packages] The “/usr/local/cpanel/scripts/update-packages” command (process 2899564) reported error number 1 when it ended.
[2023-05-19 21:15:29 +1000] The Administrator will be notified to review this output when this script completes
[2023-05-19 21:15:29 +1000] - Finished command `/usr/local/cpanel/scripts/update-packages` in 3.265 seconds
[2023-05-19 21:15:29 +1000] 34% complete
[2023-05-19 21:15:29 +1000] - Finished in 3.266 seconds
[2023-05-19 21:15:29 +1000] 36% complete
[2023-05-19 21:15:29 +1000] - Finished in 0.141 seconds
[2023-05-19 21:15:29 +1000] Processing: Purging cpupdate.conf of invalid entries
[2023-05-19 21:15:29 +1000] 37% complete
[2023-05-19 21:15:29 +1000] 39% complete
[2023-05-19 21:15:29 +1000] - Finished in 0.002 seconds
[2023-05-19 21:15:29 +1000] Purging upcp logs older than 45 days.
[2023-05-19 21:15:29 +1000] 40% complete
[2023-05-19 21:15:29 +1000] - Finished in 0.001 seconds
[2023-05-19 21:15:29 +1000] Processing: Updating cPanel signing keys.
[2023-05-19 21:15:29 +1000] 42% complete
[2023-05-19 21:15:29 +1000] - Processing command `/usr/local/cpanel/scripts/updatesigningkey`
[2023-05-19 21:15:29 +1000] - Finished command `/usr/local/cpanel/scripts/updatesigningkey` in 0.053 seconds
[2023-05-19 21:15:29 +1000] 44% complete
[2023-05-19 21:15:29 +1000] Processing: Updating system packages: sysup
[2023-05-19 21:15:29 +1000] - Processing command `/usr/local/cpanel/scripts/sysup`
[2023-05-19 21:15:30 +1000] [/usr/local/cpanel/scripts/sysup] checkyum version 22.3 (excludes: bind-chroot)
[2023-05-19 21:15:30 +1000] [/usr/local/cpanel/scripts/sysup] All Needed Packages are already installed.
[2023-05-19 21:15:30 +1000] - Finished command `/usr/local/cpanel/scripts/sysup` in 0.448 seconds
[2023-05-19 21:15:30 +1000] 45% complete
[2023-05-19 21:15:30 +1000] - Finished in 0.448 seconds
[2023-05-19 21:15:30 +1000] Processing: Restarting any outdated services
[2023-05-19 21:15:30 +1000] 47% complete
[2023-05-19 21:15:30 +1000] - Processing command `/usr/local/cpanel/scripts/find_outdated_services --auto`
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/scripts/find_outdated_services] Looking for outdated services …
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/scripts/find_outdated_services] 82 files removed
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/scripts/find_outdated_services]
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/scripts/find_outdated_services] The system found 1 outdated service:
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/scripts/find_outdated_services] queueprocd
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/scripts/find_outdated_services]
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/scripts/find_outdated_services] Restarting “queueprocd” …
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/scripts/find_outdated_services] [1mThe system has restarted “queueprocd”.[0m
[2023-05-19 21:15:32 +1000] - Finished command `/usr/local/cpanel/scripts/find_outdated_services --auto` in 2.478 seconds
[2023-05-19 21:15:32 +1000] 48% complete
[2023-05-19 21:15:32 +1000] Processing: Checking for a valid C Compiler.
[2023-05-19 21:15:32 +1000] 50% complete
[2023-05-19 21:15:32 +1000] - Processing command `/usr/local/cpanel/scripts/checkccompiler`
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/scripts/checkccompiler] C compiler (/usr/bin/gcc) OK (cached Thu May 18 21:15:33 2023)
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/scripts/checkccompiler] Tuned C compiler not available because it is not enabled
[2023-05-19 21:15:32 +1000] - Finished command `/usr/local/cpanel/scripts/checkccompiler` in 0.029 seconds
[2023-05-19 21:15:32 +1000] 52% complete
[2023-05-19 21:15:32 +1000] Processing: Ensuring locale databases are up to date
[2023-05-19 21:15:32 +1000] 53% complete
[2023-05-19 21:15:32 +1000] 55% complete
[2023-05-19 21:15:32 +1000] - Finished in 0.003 seconds
[2023-05-19 21:15:32 +1000] Processing: Migrating feature lists to current version (if needed)
[2023-05-19 21:15:32 +1000] 57% complete
[2023-05-19 21:15:32 +1000] - Processing command `/usr/local/cpanel/bin/migrate_all_feature_lists_to_current`
[2023-05-19 21:15:32 +1000] [/usr/local/cpanel/bin/migrate_all_feature_lists_to_current] Migrated 0 feature list(s)
[2023-05-19 21:15:32 +1000] - Finished command `/usr/local/cpanel/bin/migrate_all_feature_lists_to_current` in 0.034 seconds
[2023-05-19 21:15:32 +1000] 58% complete
[2023-05-19 21:15:32 +1000] Processing: Checking for main IP changes
[2023-05-19 21:15:32 +1000] 60% complete
[2023-05-19 21:15:32 +1000] - Processing command `/usr/local/cpanel/scripts/mainipcheck`
[2023-05-19 21:15:33 +1000] - Finished command `/usr/local/cpanel/scripts/mainipcheck` in 0.882 seconds
[2023-05-19 21:15:33 +1000] 61% complete
[2023-05-19 21:15:33 +1000] Processing: Updating neighbor netblocks
[2023-05-19 21:15:33 +1000] 63% complete
[2023-05-19 21:15:33 +1000] - Processing command `/usr/local/cpanel/scripts/update_neighbor_netblocks`
[2023-05-19 21:15:33 +1000] - Finished command `/usr/local/cpanel/scripts/update_neighbor_netblocks` in 0.045 seconds
[2023-05-19 21:15:33 +1000] 65% complete
[2023-05-19 21:15:33 +1000] Processing: Updating known proxy ips
[2023-05-19 21:15:33 +1000] 66% complete
[2023-05-19 21:15:33 +1000] - Processing command `/usr/local/cpanel/scripts/update_known_proxy_ips`
[2023-05-19 21:15:33 +1000] - Finished command `/usr/local/cpanel/scripts/update_known_proxy_ips` in 0.062 seconds
[2023-05-19 21:15:33 +1000] 68% complete
[2023-05-19 21:15:33 +1000] Processing: Validating server hostname
[2023-05-19 21:15:33 +1000] 69% complete
[2023-05-19 21:15:33 +1000] - Processing command `/usr/local/cpanel/scripts/check_valid_server_hostname --notify`
[2023-05-19 21:15:33 +1000] [/usr/local/cpanel/scripts/check_valid_server_hostname] OK
[2023-05-19 21:15:33 +1000] - Finished command `/usr/local/cpanel/scripts/check_valid_server_hostname --notify` in 0.060 seconds
[2023-05-19 21:15:33 +1000] 71% complete
[2023-05-19 21:15:33 +1000] Processing: Validating cPanel system users
[2023-05-19 21:15:33 +1000] 73% complete
[2023-05-19 21:15:33 +1000] - Processing command `/usr/local/cpanel/scripts/checkusers`
[2023-05-19 21:15:33 +1000] [/usr/local/cpanel/scripts/checkusers] Homedir: /var/cpanel/userhomes/cpanel
[2023-05-19 21:15:33 +1000] - Finished command `/usr/local/cpanel/scripts/checkusers` in 0.006 seconds
[2023-05-19 21:15:34 +1000] 74% complete
[2023-05-19 21:15:34 +1000] Processing: Checking and repairing nameserver config
[2023-05-19 21:15:34 +1000] 76% complete
[2023-05-19 21:15:34 +1000] - Processing command `/usr/local/cpanel/scripts/fixrndc`
[2023-05-19 21:15:34 +1000] - Finished command `/usr/local/cpanel/scripts/fixrndc` in 0.048 seconds
[2023-05-19 21:15:34 +1000] 77% complete
[2023-05-19 21:15:34 +1000] Processing: Setting up IP aliases startup
[2023-05-19 21:15:34 +1000] 79% complete
[2023-05-19 21:15:34 +1000] - Processing command `/usr/local/cpanel/whostmgr/bin/setupipaliases`
[2023-05-19 21:15:34 +1000] - Finished command `/usr/local/cpanel/whostmgr/bin/setupipaliases` in 0.129 seconds
[2023-05-19 21:15:34 +1000] 81% complete
[2023-05-19 21:15:34 +1000] Processing: Checking cPanel packages (with no digest check or broken check)
[2023-05-19 21:15:34 +1000] - Processing command `/usr/local/cpanel/scripts/check_cpanel_pkgs --list-only --long-list --notify --no-digest --no-broken`
[2023-05-19 21:15:34 +1000] - Finished command `/usr/local/cpanel/scripts/check_cpanel_pkgs --list-only --long-list --notify --no-digest --no-broken` in 0.506 seconds
[2023-05-19 21:15:34 +1000] 82% complete
[2023-05-19 21:15:34 +1000] - Finished in 0.507 seconds
[2023-05-19 21:15:34 +1000] Processing: Running env auto repair
[2023-05-19 21:15:34 +1000] 84% complete
[2023-05-19 21:15:34 +1000] - Processing command `/usr/local/cpanel/scripts/vzzo-fixer`
[2023-05-19 21:15:34 +1000] - Finished command `/usr/local/cpanel/scripts/vzzo-fixer` in 0.005 seconds
[2023-05-19 21:15:34 +1000] 85% complete
[2023-05-19 21:15:34 +1000] - Processing command `/usr/local/cpanel/scripts/quota_auto_fix`
[2023-05-19 21:15:34 +1000] [/usr/local/cpanel/scripts/quota_auto_fix] quota test: check passed
[2023-05-19 21:15:34 +1000] - Finished command `/usr/local/cpanel/scripts/quota_auto_fix` in 0.013 seconds
[2023-05-19 21:15:34 +1000] 87% complete
[2023-05-19 21:15:34 +1000] - Processing command `/usr/local/cpanel/scripts/clear_orphaned_virtfs_mounts --inactiveonly`
[2023-05-19 21:15:34 +1000] - Finished command `/usr/local/cpanel/scripts/clear_orphaned_virtfs_mounts --inactiveonly` in 0.065 seconds
[2023-05-19 21:15:34 +1000] 89% complete
[2023-05-19 21:15:34 +1000] - Processing command `/usr/local/cpanel/scripts/disable_prelink`
[2023-05-19 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/disable_prelink` in 0.243 seconds
[2023-05-19 21:15:35 +1000] 90% complete
[2023-05-19 21:15:35 +1000] Processing: Cleaning up orphaned filesystem quotas
[2023-05-19 21:15:35 +1000] 92% complete
[2023-05-19 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/cleanquotas`
[2023-05-19 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/cleanquotas` in 0.065 seconds
[2023-05-19 21:15:35 +1000] 93% complete
[2023-05-19 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/autorepair autorepair`
[2023-05-19 21:15:35 +1000] [/usr/local/cpanel/scripts/autorepair] Requesting script ... Done
[2023-05-19 21:15:35 +1000] [/usr/local/cpanel/scripts/autorepair] Auto Repair is running...Running Auto Repair routines
[2023-05-19 21:15:35 +1000] [/usr/local/cpanel/scripts/autorepair] Finished running Auto Repair routines
[2023-05-19 21:15:35 +1000] [/usr/local/cpanel/scripts/autorepair] ...Auto Repair is done.
[2023-05-19 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/autorepair autorepair` in 0.186 seconds
[2023-05-19 21:15:35 +1000] 95% complete
[2023-05-19 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/purge_old_config_caches`
[2023-05-19 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/purge_old_config_caches` in 0.021 seconds
[2023-05-19 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/cleansessions`
[2023-05-19 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/cleansessions` in 0.042 seconds
[2023-05-19 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/checkbashshell`
[2023-05-19 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/checkbashshell` in 0.006 seconds
[2023-05-19 21:15:35 +1000] - Finished in 0.000 seconds
[2023-05-19 21:15:35 +1000] Setting up cronjobs
[2023-05-19 21:15:35 +1000] Setting Up update_db_cache Crontab
[2023-05-19 21:15:35 +1000] Setting Up update_maiman_cache Crontab
[2023-05-19 21:15:35 +1000] Setting Up dcpumon Crontab
[2023-05-19 21:15:35 +1000] - Finished in 0.014 seconds
[2023-05-19 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/dnsqueuecron`
[2023-05-19 21:15:35 +1000] - Finished command `/usr/local/cpanel/scripts/dnsqueuecron` in 0.006 seconds
[2023-05-19 21:15:35 +1000] Processing: Rebuild WHM chrome cache
[2023-05-19 21:15:35 +1000] - Processing command `/usr/local/cpanel/scripts/rebuild_whm_chrome`
[2023-05-19 21:15:37 +1000] - Finished command `/usr/local/cpanel/scripts/rebuild_whm_chrome` in 2.290 seconds
[2023-05-19 21:15:37 +1000] Processing: Scheduling task to check service default SSL/TLS certificates
[2023-05-19 21:15:37 +1000] - Finished in 0.002 seconds
[2023-05-19 21:15:37 +1000] Processing: Purging invalid or soon-to-expire Domain TLS entries for service domains
[2023-05-19 21:15:37 +1000] - Processing command `/usr/local/cpanel/scripts/check_domain_tls_service_domains.pl --prune`
[2023-05-19 21:15:37 +1000] - Finished command `/usr/local/cpanel/scripts/check_domain_tls_service_domains.pl --prune` in 0.148 seconds
[2023-05-19 21:15:37 +1000] Processing: Cleaning up temporary wheel/sudo users
[2023-05-19 21:15:37 +1000] - Processing command `/usr/local/cpanel/scripts/clean_up_temp_wheel_users`
[2023-05-19 21:15:37 +1000] - Finished command `/usr/local/cpanel/scripts/clean_up_temp_wheel_users` in 0.087 seconds
[2023-05-19 21:15:37 +1000] - Finished in 0.000 seconds
[2023-05-19 21:15:37 +1000] - Finished in 0.000 seconds
[2023-05-19 21:15:37 +1000] - Finished in 0.000 seconds
[2023-05-19 21:15:38 +1000] - Finished in 0.315 seconds
[2023-05-19 21:15:38 +1000] Processing: Cleaning Signature Timestamp Cache
[2023-05-19 21:15:38 +1000] - Finished in 0.001 seconds
[2023-05-19 21:15:38 +1000] - Finished in 0.003 seconds
[2023-05-19 21:15:38 +1000] Processing: Checking End Of Life for current version.
[2023-05-19 21:15:38 +1000] - Finished in 0.067 seconds
[2023-05-19 21:15:38 +1000] Processing:
[2023-05-19 21:15:38 +1000] DNSONLY maintenance complete.
=> Log closed Fri May 19 21:15:38 2023
----------------------------------------------------------------------------------------------------
=> Log opened from cPanel Update (upcp) - Slave (2899489) at Fri May 19 21:15:38 2023
[2023-05-19 21:15:38 +1000] E Pre Maintenance ended, however it did not exit cleanly (256). The following events were logged: "scripts/update-packages". Please check the logs for an indication of what happened
[2023-05-19 21:15:38 +1000] 95% complete
[2023-05-19 21:15:38 +1000] Running Standardized hooks
[2023-05-19 21:15:38 +1000] 100% complete
[2023-05-19 21:15:38 +1000]
[2023-05-19 21:15:38 +1000] cPanel update completed
[2023-05-19 21:15:38 +1000] A log of this update is available at /var/cpanel/updatelogs/update.2899489.1343054455.1671064357.log
[2023-05-19 21:15:38 +1000] Removing upcp pidfile
[2023-05-19 21:15:38 +1000]
[2023-05-19 21:15:38 +1000] Completed all updates
=> Log closed Fri May 19 21:15:38 2023
=> Log closed Fri May 19 21:15:39 2023

 

[bloatedstoat]

Thanks Tom,

Your log files, in particular the one preceding your issues are visibly benign. Mine has some really unusual entries in them that for some odd reason I am unable to include here, when I try the page goes white, has a little wheel spinning and that's where it stays.

I'll see what cPanel has to say about it in the ticket response before doing anything else.
Super frustrating, literally had this server less than a month.

 

[bloatedstoat]

In my case the issue was a rogue repository serving outdated packages, CloudLinux Engineer found the issue within half hour of opening the ticket to its conclusion.

Thank you for your time. The issue was with this automatically added repository:
repo.cloudlinux.com_cloudlinux_8_BaseOS_x86_64_os_
It was causing the conflicts due to having outdated packages (because this is the BaseOS repo, which is for unregistered users).
I removed the repo file, and "yum" can now complete the update:

I suspect your issue Tom is the same thing, a repository with different packages. Hopefully someone at AlmaLinux can isolate it for you.

 

[tom9909]

In my case the issue was a rogue repository serving outdated packages, CloudLinux Engineer found the issue within half hour of opening the ticket to its conclusion.

Thank you for your time. The issue was with this automatically added repository:
repo.cloudlinux.com_cloudlinux_8_BaseOS_x86_64_os_
It was causing the conflicts due to having outdated packages (because this is the BaseOS repo, which is for unregistered users).
I removed the repo file, and "yum" can now complete the update:

I suspect your issue Tom is the same thing, a repository with different packages. Hopefully someone at AlmaLinux can isolate it for you.

Thanks for the assistance with this. Ill head over to the AlmaLinux forums and advise them there.

 

[tom9909]

It appears that cPanel are excluding kernel updates for some reason.

Running the following resolved the underlying issue.

dnf clean all
dnf update kernel

Credit to Daniel Pearson over at the AlmaLinux forums for pointing this out.

 

[2gendevs]

@tom9909's commands fix this error for us too.

dnf clean all
dnf update kernel